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  • Rapid and efficient synthesis of nucleoside polyphosphates and their conjugates using sulfonyl imidazolium salts.

Rapid and efficient synthesis of nucleoside polyphosphates and their conjugates using sulfonyl imidazolium salts.

Current protocols in nucleic acid chemistry (2012-12-21)
Samy Mohamady, Scott D Taylor
ABSTRACT

This unit describes a method for preparing nucleoside polyphosphates and their conjugates such as nucleoside triphosphates, symmetrical and unsymmetrical dinucleoside polyphosphates and sugar nucleotides. The protocols employ sulfonyl imidazolium salts (SnISs) as coupling reagents. These reagents are prepared in two steps in very high yield from commercially available materials and can be stored for at least 1 year at -20°C. The tetra-n-butylammonium salts of nucleoside mono-, di-, or triphosphates are reacted with the SnISs to form reactive phosphoryl imidazolium donors. These donors are reacted with the tetra-n-butylammonium salts of pyrophosphate, nucleotide mono- or diphosphates or sugar-1-phosphates to give the nucleoside polyphosphates and their conjugates in excellent yields.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
N,N-Dimethylformamide, JIS special grade, ≥99.5%
Sigma-Aldrich
N,N-Dimethylformamide, SAJ first grade, ≥99.0%
Sigma-Aldrich
Tetrabutylammonium cyanide, technical, ≥80%
Supelco
Tetrabutylammonium bisulfate, suitable for ion pair chromatography, LiChropur, ≥99.0%
Sigma-Aldrich
Magnesium chloride solution, BioUltra, Molecular Biology, ~0.025 M in H2O
Supelco
Tetrabutylammonium hydroxide solution, ~40% in water, suitable for ion chromatography
Sigma-Aldrich
Tetrabutylammonium bisulfate, puriss., ≥99.0% (T)
Supelco
Tetrabutylammonium perchlorate, for electrochemical analysis, ≥99.0%
Supelco
N,N-Dimethylformamide, analytical standard
Sigma-Aldrich
Magnesium chloride solution, BioUltra, Molecular Biology, ~1 M in H2O
Sigma-Aldrich
Tetrabutylammonium hydroxide solution, technical, ~40% in H2O (~1.5 M)
Sigma-Aldrich
Tetrabutylammonium hydrogensulfate, 97%
Sigma-Aldrich
Magnesium chloride solution, BioUltra, Molecular Biology, 2 M in H2O
Sigma-Aldrich
Tetrabutylammonium hydroxide solution, 53.5-56.5% in H2O
Sigma-Aldrich
N,N-Dimethylformamide, anhydrous, 99.8%
Sigma-Aldrich
Tetrabutylammonium cyanide, 95%
Sigma-Aldrich
Tetrabutylammonium hydroxide solution, 1.0 M in methanol
Sigma-Aldrich
N,N-Dimethylformamide, ACS reagent, ≥99.8%
Sigma-Aldrich
Tetrabutylammonium hydroxide solution, 40 wt. % in H2O
Sigma-Aldrich
N,N-Dimethylformamide, Molecular Biology, ≥99%
Sigma-Aldrich
Magnesium chloride solution, Molecular Biology, 1.00 M±0.01 M
Sigma-Aldrich
Magnesium chloride solution, PCR Reagent, 25 mM MgCI2 solution for PCR
Sigma-Aldrich
N,N-Dimethylformamide, suitable for HPLC, ≥99.9%
Sigma-Aldrich
Magnesium chloride solution, 0.1 M
Sigma-Aldrich
Tetrabutylammonium perchlorate, ≥95.0% (T)
Sigma-Aldrich
Tetrabutylammonium phosphate monobasic solution, 1.0 M in H2O
Sigma-Aldrich
N,N-Dimethylformamide, suitable for HPLC, ≥99.9%
Sigma-Aldrich
N,N-Dimethylformamide, ACS reagent, ≥99.8%
Sigma-Aldrich
N,N-Dimethylformamide, ReagentPlus®, ≥99%
Sigma-Aldrich
N,N-Dimethylformamide, puriss. p.a., ACS reagent, reag. Ph. Eur., ≥99.8% (GC)