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Merck

A0410

Aminoallyl-dUTP sodium salt

≥85%, lyophilized powder

Synonym(s):

5-[3-Aminoallyl]-2′-deoxyuridine 5′-triphosphate, AA-dUTP

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About This Item

Empirical Formula (Hill Notation):
C12H20N3O14P3 · xNa+
CAS Number:
936327-10-5
Molecular Weight:
523.22 (free acid basis)
MDL number:
MFCD06200396
UNSPSC Code:
41106305
NACRES:
NA.51
Assay:
≥85%
Form:
lyophilized powder
Storage temp.:
−70°C

Key Documents

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Product Name

Aminoallyl-dUTP sodium salt, ≥85%, lyophilized powder

InChI key

YWKTUHBZWBRYHX-TYYBGVCCSA-N

SMILES string

[P](=O)(O[P](=O)(OCC1OC(CC1O)N2C=C(C(=O)NC2=O)\C=C\CN)O)(O[P](=O)(O)O)O.N

assay

≥85%

form

lyophilized powder

shipped in

dry ice

storage temp.

−70°C

Quality Level

200

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Application

Aminoallyl-dUTP may be used for indirect stable labeling of first-strand cDNA synthesis via polymerase chain reaction (PCR). Aminoallyl-dUTP functions as a reactive site for subsequent labeling by reactive fluorescent probes. Aminoallyl-dUTP may also be useful in the construction of reactive DNA scaffolds.
Aminoallyl-dUTP sodium salt has been used:
  • to add to the deoxynucleoside triphosphate mix for complementary DNA (cDNA) synthesis
  • for the generation of chromatin immunoprecipitation (ChIP) probes
  • in the reverse transcription of RNA for the synthesis of fluorescent labelled probes

Biochem/physiol Actions

Aminoallyl-dUTP sodium salt/5-(3-aminoallyl)-2′-deoxyuridine 5′-triphosphate (aa-dUTP) have been used mainly in two-step labeling approach for the synthesis of nucleic acid hybridisation probe.

Storage Class

11 - Combustible Solids

wgk

WGK 3

flash_point_f

Not applicable

flash_point_c

Not applicable

ppe

Eyeshields, Gloves, type N95 (US)

Regulatory Listings

Regulatory Listings are mainly provided for chemical products. Only limited information can be provided here for non-chemical products. No entry means none of the components are listed. It is the user’s obligation to ensure the safe and legal use of the product.

A0410-PH: + A0410-BULK: + A0410-VAR: + A0410-10MG: + A0410-1MG-PW: + A0410-BULK-N: + A0410PROC: + A0410-5MG: + A0410-1MG: + A0410-5X1MG:

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Certificates of Analysis (COA)

Lot/Batch Number
0000463816
0000463816
0000379569
0000344576
0000338589

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Fluorescent DNA hybridization probe preparation using amine modification and reactive dye coupling
Cox W G and Singer V L
Biotechniques, 36(1), 114-122 (2004)
Miguel A Matilla et al.
Genome biology, 8(9), R179-R179 (2007-09-06)
Mutualistic interactions less well known than those between rhizobia and legumes are commonly found between plants and bacteria, frequently pseudomonads, which colonize roots and adjacent soil areas (the rhizosphere). A global analysis of Pseudomonas putida genes expressed during their interaction
Lorenzo Berti et al.
Nanotechnology, 20(23), 235101-235101 (2009-05-19)
Functional DNA scaffolds can be defined as DNA-based structures comprising chemical moieties facilitating and guiding the immobilization of additional nanocomponents. Due to the limited reactivity of DNA there is currently a need to develop rapid routes to expand its chemical
Chromatin immunoprecipitation (ChIP) on chip experiments uncover a widespread distribution of NF-Y binding CCAAT sites outside of core promoters
Testa A, et al.
The Journal of Biological Chemistry, 280(14), 13606-13615 (2005)
Effect of the Colorless non-ripening mutation on cell wall biochemistry and gene expression during tomato fruit development and ripening
Eriksson E M, et al.
Plant Physiology, 136(4), 4184-4197 (2004)
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